Why do we try to cut corners on our daily supplies when we've paid thousands for our machines. I doubt that the car glue is the same as the quilting glue. Mainly because the application has a different purpose. The quilting glue is temporary and washes out. The car glue is meant to hold the lining on permanently.
Why take the chance of damaging our machines.
Of course, if the project is a wall hanging or "art quilt" not meant for washing, then a craft glue could be used. Be careful about putting it back under the needle though.