I don't live in Indy but when I was there for a day and had time to check out shops, I found two that I would highly recommend:
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9840 N Michigan Rd, Carmel, IN 46032 (317) 757-8340
Quilts Plus[/h]
1748 E 86th St, Indianapolis, IN 46240
I haven't been to this one but plan to next time I'm there:
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The Back Door[/h]
2503 Fairview Pl Ste W, Greenwood, IN 46142, (317) 882-2120