Hey Tiff...it leaves out more than just the "J" patches when you are looking at the rotary cutting instructions. I PP'ed this block and it printed the pattern out just fine. I looked at the templates for you and you could measure it from that to use for your cutting dimension though, I think.
I've found several things wrong when printing patterns through the software...you need to really look at each one to make sure its right before you just dive right in.