I feel you pain. Noticed on a quilt I glue basted 2 blocks in a row were flipped and error was VERY noticable. Closer I looked. error in EVERY row. So I peeled, or is it pealed, the top off. Fixed the errors and finished the quilt.
Now with yours. I think I'd just quilt it and call it done. If it really,, really bothers you, take it apart. When I separated the top from the batting, I did not sprilz it. Spritzing will make the glue tacky.
Let us know what your decide. Good luck.